Histogram aggregator, if each individual histogram already has error bars. More...
#include <tomographer/histogram.h>
Inheritance diagram for Tomographer::AggregatedHistogramWithErrorBars< HistogramType_, CountRealType_ >: Collaboration diagram for Tomographer::AggregatedHistogramWithErrorBars< HistogramType_, CountRealType_ >:Public Types | |
| typedef HistogramType_ | HistogramType |
| The histogram type corresponding to the result of a task. More... | |
| typedef HistogramType::Params | HistogramParams |
| The parameters type used to describe our histogram range and number of bins. | |
| typedef HistogramType::Scalar | HistogramScalarType |
| The scalar type of the histogram (i.e., x-axis labels) | |
| typedef CountRealType_ | CountRealType |
| Type used for averaged histogram counts (e.g. double) | |
| typedef AveragedHistogram< HistogramType, CountRealType > | FinalHistogramType |
| The type of the final resulting, averaged histogram. | |
| typedef Histogram< typename HistogramType::Scalar, typename HistogramType::CountType > | SimpleHistogramType |
| The "simple" histogram, as if without binning analysis. More... | |
| typedef AveragedHistogram< SimpleHistogramType, CountRealType > | SimpleFinalHistogramType |
| Properly averaged "simple" histogram, with naive statistical standard deviation error bars from the several task runs. | |
Public Member Functions | |
| AggregatedHistogramWithErrorBars (AggregatedHistogramWithErrorBars &&x) | |
| AggregatedHistogramWithErrorBars (FinalHistogramType &&x, SimpleFinalHistogramType &&y) | |
| void | printHistogramCsv (std::ostream &stream, const std::string sep="\, const std::string linesep="\", const int precision=10) |
| Produce a comma-separated-value (CSV) representation of the final aggregated histogram data. More... | |
Static Public Member Functions | |
| template<typename ContainerType , typename ExtractHistogramFn > | |
| static AggregatedHistogramWithErrorBars | aggregate (const HistogramParams ¶ms, const ContainerType &list, ExtractHistogramFn extract_histogram_fn) |
| Aggregate a list of histograms. More... | |
Public Attributes | |
| FinalHistogramType | final_histogram |
| The final histogram, properly combining the error bars of each histogram. | |
| SimpleFinalHistogramType | simple_final_histogram |
| The "naive" final histogram, ignoring the error bars of each histogram (see class doc) | |
Detailed Description
template<typename HistogramType_, typename CountRealType_>
class Tomographer::AggregatedHistogramWithErrorBars< HistogramType_, CountRealType_ >
Histogram aggregator, if each individual histogram already has error bars.
This class takes care of combining histograms together into a final, averaged histogram with error bars.
Two histograms are provided. The final_histogram is the properly averaged histogram built by averaging the histograms and combining the error bars together (see AveragedHistogram). Use this one.
The histogram simple_final_histogram, is a histogram built by averaging the histograms, but ignoring their error bars and simply calculating the error bars with the standard deviation of the different histograms as if each individual histogram didn't have error bars. If you have enough different histograms, these error bars may also be meaningful, and can be used to compare to the error bars given by each histogram. This can be useful, for instance, to test a binning analysis procedure to make sure that the error bars from that procedure are of same order of magnitude as "naive" error bars from individual runs.
If you're using the Tomographer::MHRWTasks::ValueHistogramTools tools, note that you can directly get the right HistogramAggregator type by calling the method CDataBase::aggregateResultHistograms() using your MHRandomWalkCData class deriving from Tomographer::MHRWTasks::ValueHistogramTools::CDataBase.
Use the static aggregate() function to construct an object instance, aggregating histograms from a list.
Definition at line 1218 of file histogram.h.
Member Typedef Documentation
§ HistogramType
| typedef HistogramType_ Tomographer::AggregatedHistogramWithErrorBars< HistogramType_, CountRealType_ >::HistogramType |
The histogram type corresponding to the result of a task.
- Warning
- This histogram type must provide error bars.
Definition at line 1231 of file histogram.h.
§ SimpleHistogramType
| typedef Histogram<typename HistogramType::Scalar, typename HistogramType::CountType> Tomographer::AggregatedHistogramWithErrorBars< HistogramType_, CountRealType_ >::SimpleHistogramType |
The "simple" histogram, as if without binning analysis.
Definition at line 1251 of file histogram.h.
Member Function Documentation
§ aggregate()
|
inlinestatic |
Aggregate a list of histograms.
Construct a AggregatedHistogramWithErrorBars by aggregating a list of histograms given as list. The list might contain more complicated objects from which the relevant histogram is to be extracted, the callable extract_histogram_fn is called to extract the histogram. For instance, list may be a list of run task results which contain a histogram (among other info).
- Parameters
-
params The histogram parameters to initialize the final histogram with.
- Warning
- No check is made that the params matches the parameters of each aggregated histogram.
- Parameters
-
list The list of objects from which to extract a histogram. This should be some container type; the only requirement is that one should be able to iterate over it with a range-for loop with a "const auto&" item. extract_histogram_fn A callable which is called for each item of the list; it is provided a single argument, the list item, and is expected to return the histogram which will be aggregated with the others.
See also Tomographer::MHRWTasks::ValueHistogramTools::CDataBase::aggregateResultHistograms()
Definition at line 1303 of file histogram.h.
§ printHistogramCsv()
|
inline |
Produce a comma-separated-value (CSV) representation of the final aggregated histogram data.
The histogram data is written in CSV format on the C++ output stream stream. You may specify the cell separator sep (by default a TAB char), the line separator (by default a simple newline), and the precision used when exporting the values. Numbers are written in scientific format (e.g. 1.205115485e-01).
The output consists of four columns. Titles are printed on the first line ("Value", "Counts", "Error", "SimpleError"). The first column holds the values, i.e., the x-axis of the histogram; the second column holds the counts (normalized to the number of samples); the third column holds the error bar on the counts (reliable error bar from binning analysis), and the fourth column holds the naive error bar obtained when we ignore the binning analysis.
Definition at line 1345 of file histogram.h.
The documentation for this class was generated from the following file:
- tomographer/histogram.h (v5.4)